Datasetchrom
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetREACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX
Enrichment Score (ES)-0.6370299
Normalized Enrichment Score (NES)-2.7739644
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PPP2R1APPP2R1A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform9140.569-0.2665No
2RPL13RPL13
Entrez,  Source
ribosomal protein L1310210.511-0.2903No
3EIF4A311100.455-0.3096No
4RBM8ARBM8A
Entrez,  Source
RNA binding motif protein 8A11260.445-0.3071No
5NCBP1NCBP1
Entrez,  Source
nuclear cap binding protein subunit 1, 80kDa12920.348-0.3513No
6RPL32RPL32
Entrez,  Source
ribosomal protein L3212990.345-0.3476No
7RNPS1RNPS1
Entrez,  Source
RNA binding protein S1, serine-rich domain14210.268-0.3798No
8PPP2CAPPP2CA
Entrez,  Source
protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform15930.158-0.4289No
9RPL26L1RPL26L1
Entrez,  Source
ribosomal protein L26-like 116070.147-0.4305No
10ETF1ETF1
Entrez,  Source
eukaryotic translation termination factor 116620.113-0.4449No
11RPS27ARPS27A
Entrez,  Source
ribosomal protein S27a17390.066-0.4668No
12RPL12RPL12
Entrez,  Source
ribosomal protein L1217850.038-0.4798No
13PABPC1PABPC1
Entrez,  Source
poly(A) binding protein, cytoplasmic 118130.026-0.4875No
14NCBP2NCBP2
Entrez,  Source
nuclear cap binding protein subunit 2, 20kDa1933-0.062-0.5224No
15RPL15RPL15
Entrez,  Source
ribosomal protein L151943-0.068-0.5240No
16RPL10ARPL10A
Entrez,  Source
ribosomal protein L10a1954-0.075-0.5258No
17MAGOHMAGOH
Entrez,  Source
mago-nashi homolog, proliferation-associated (Drosophila)1973-0.086-0.5299No
18UPF3BUPF3B
Entrez,  Source
UPF3 regulator of nonsense transcripts homolog B (yeast)1979-0.089-0.5300No
19RPL18RPL18
Entrez,  Source
ribosomal protein L182012-0.114-0.5378No
20RPS24RPS24
Entrez,  Source
ribosomal protein S242211-0.253-0.5935No
21RPL5RPL5
Entrez,  Source
ribosomal protein L52234-0.269-0.5958No
22RPL28RPL28
Entrez,  Source
ribosomal protein L282309-0.310-0.6132No
23RPL11RPL11
Entrez,  Source
ribosomal protein L112370-0.350-0.6257No
24RPL23ARPL23A
Entrez,  Source
ribosomal protein L23a2397-0.373-0.6276No
25RPL7ARPL7A
Entrez,  Source
ribosomal protein L7a2402-0.376-0.6228No
26RPL13ARPL13A
Entrez,  Source
ribosomal protein L13a2427-0.399-0.6237No
27RPL29RPL29
Entrez,  Source
ribosomal protein L292466-0.433-0.6283No
28RPL21RPL21
Entrez,  Source
ribosomal protein L212496-0.455-0.6298Yes
29RPL8RPL8
Entrez,  Source
ribosomal protein L82503-0.460-0.6243Yes
30RPL27RPL27
Entrez,  Source
ribosomal protein L272512-0.469-0.6192Yes
31RPL14RPL14
Entrez,  Source
ribosomal protein L142534-0.488-0.6178Yes
32RPL6RPL6
Entrez,  Source
ribosomal protein L62569-0.516-0.6199Yes
33RPL17RPL17
Entrez,  Source
ribosomal protein L172574-0.518-0.6128Yes
34RPL18ARPL18A
Entrez,  Source
ribosomal protein L18a2598-0.538-0.6112Yes
35RPL4RPL4
Entrez,  Source
ribosomal protein L42632-0.572-0.6121Yes
36RPL27ARPL27A
Entrez,  Source
ribosomal protein L27a2635-0.574-0.6035Yes
37RPS8RPS8
Entrez,  Source
ribosomal protein S82658-0.592-0.6007Yes
38RPL35RPL35
Entrez,  Source
ribosomal protein L352691-0.615-0.6006Yes
39RPL9RPL9
Entrez,  Source
ribosomal protein L92754-0.671-0.6086Yes
40RPL7RPL7
Entrez,  Source
ribosomal protein L72766-0.684-0.6011Yes
41RPS15RPS15
Entrez,  Source
ribosomal protein S152780-0.712-0.5937Yes
42RPS7RPS7
Entrez,  Source
ribosomal protein S72811-0.746-0.5908Yes
43RPS5RPS5
Entrez,  Source
ribosomal protein S52832-0.773-0.5846Yes
44RPL30RPL30
Entrez,  Source
ribosomal protein L302838-0.780-0.5737Yes
45RPSARPSA
Entrez,  Source
ribosomal protein SA2843-0.783-0.5624Yes
46RPS3ARPS3A
Entrez,  Source
ribosomal protein S3A2847-0.786-0.5508Yes
47RPL24RPL24
Entrez,  Source
ribosomal protein L242863-0.805-0.5425Yes
48RPL34RPL34
Entrez,  Source
ribosomal protein L342865-0.809-0.5300Yes
49RPL23RPL23
Entrez,  Source
ribosomal protein L232891-0.831-0.5243Yes
50RPL35ARPL35A
Entrez,  Source
ribosomal protein L35a2898-0.838-0.5128Yes
51RPL3RPL3
Entrez,  Source
ribosomal protein L32902-0.843-0.5003Yes
52RPLP0RPLP0
Entrez,  Source
ribosomal protein, large, P02912-0.858-0.4894Yes
53RPL36RPL36
Entrez,  Source
ribosomal protein L362920-0.867-0.4777Yes
54RPS13RPS13
Entrez,  Source
ribosomal protein S132928-0.875-0.4659Yes
55RPS9RPS9
Entrez,  Source
ribosomal protein S92930-0.876-0.4522Yes
56RPL22RPL22
Entrez,  Source
ribosomal protein L222942-0.889-0.4414Yes
57RPS10RPS10
Entrez,  Source
ribosomal protein S102958-0.909-0.4315Yes
58RPL10RPL10
Entrez,  Source
ribosomal protein L102961-0.912-0.4176Yes
59EIF4G1EIF4G1
Entrez,  Source
eukaryotic translation initiation factor 4 gamma, 12964-0.915-0.4036Yes
60RPL31RPL31
Entrez,  Source
ribosomal protein L312965-0.916-0.3890Yes
61RPS25RPS25
Entrez,  Source
ribosomal protein S252976-0.938-0.3771Yes
62RPS29RPS29
Entrez,  Source
ribosomal protein S292989-0.964-0.3654Yes
63RPS6RPS6
Entrez,  Source
ribosomal protein S62990-0.965-0.3501Yes
64RPS3RPS3
Entrez,  Source
ribosomal protein S32992-0.968-0.3350Yes
65RPS11RPS11
Entrez,  Source
ribosomal protein S112996-0.971-0.3204Yes
66UPF2UPF2
Entrez,  Source
UPF2 regulator of nonsense transcripts homolog (yeast)3002-0.983-0.3063Yes
67RPS14RPS14
Entrez,  Source
ribosomal protein S143010-0.996-0.2926Yes
68FAUFAU
Entrez,  Source
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S303011-0.998-0.2767Yes
69RPS23RPS23
Entrez,  Source
ribosomal protein S233028-1.022-0.2652Yes
70RPL38RPL38
Entrez,  Source
ribosomal protein L383041-1.055-0.2521Yes
71RPS18RPS18
Entrez,  Source
ribosomal protein S183053-1.078-0.2382Yes
72RPS16RPS16
Entrez,  Source
ribosomal protein S163066-1.097-0.2244Yes
73RPS2RPS2
Entrez,  Source
ribosomal protein S23076-1.109-0.2095Yes
74RPS19RPS19
Entrez,  Source
ribosomal protein S193083-1.121-0.1935Yes
75RPL37ARPL37A
Entrez,  Source
ribosomal protein L37a3088-1.125-0.1768Yes
76RPS4XRPS4X
Entrez,  Source
ribosomal protein S4, X-linked3097-1.137-0.1611Yes
77RPS21RPS21
Entrez,  Source
ribosomal protein S213111-1.163-0.1465Yes
78RPS12RPS12
Entrez,  Source
ribosomal protein S123149-1.236-0.1380Yes
79RPS28RPS28
Entrez,  Source
ribosomal protein S283187-1.329-0.1280Yes
80RPLP2RPLP2
Entrez,  Source
ribosomal protein, large, P23209-1.380-0.1124Yes
81RPS15ARPS15A
Entrez,  Source
ribosomal protein S15a3238-1.448-0.0978Yes
82RPL19RPL19
Entrez,  Source
ribosomal protein L193243-1.476-0.0756Yes
83RPS26RPS26
Entrez,  Source
ribosomal protein S263292-1.635-0.0640Yes
84RPS20RPS20
Entrez,  Source
ribosomal protein S203295-1.644-0.0385Yes
85RPS27RPS27
Entrez,  Source
ribosomal protein S27 (metallopanstimulin 1)3354-1.987-0.0244Yes
86RPLP1RPLP1
Entrez,  Source
ribosomal protein, large, P13377-2.4230.0075Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX: Random ES distribution   
Gene set null distribution of ES for REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX