Datasetchrom
PhenotypeNoPhenotypeAvailable
Upregulated in classna_neg
GeneSetREACTOME_AXON_GUIDANCE
Enrichment Score (ES)-0.39348537
Normalized Enrichment Score (NES)-1.5883113
Nominal p-value0.007894737
FDR q-value0.04973446
FWER p-Value0.72
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_AXON_GUIDANCE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1AP2A2AP2A2
Entrez,  Source
adaptor-related protein complex 2, alpha 2 subunit1431.757-0.0027No
2KIF4AKIF4A
Entrez,  Source
kinesin family member 4A1541.6860.0327No
3CLTACLTA
Entrez,  Source
clathrin, light chain (Lca)1661.6260.0665No
4MAPK3MAPK3
Entrez,  Source
mitogen-activated protein kinase 31931.5550.0941No
5CDC42CDC42
Entrez,  Source
cell division cycle 42 (GTP binding protein, 25kDa)1981.5230.1276No
6RAC2RAC2
Entrez,  Source
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)3301.1980.1158No
7CDK14720.9770.0959No
8CREB1CREB1
Entrez,  Source
cAMP responsive element binding protein 15030.9430.1084No
9STIP1STIP1
Entrez,  Source
stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)6580.7810.0802No
10CSNK2BCSNK2B
Entrez,  Source
casein kinase 2, beta polypeptide7140.7260.0803No
11TLN1TLN1
Entrez,  Source
talin 17190.7210.0955No
12MSNMSN
Entrez,  Source
moesin10060.5200.0219No
13MAPK1MAPK1
Entrez,  Source
mitogen-activated protein kinase 111050.4590.0030No
14HSP90AA1HSP90AA1
Entrez,  Source
heat shock protein 90kDa alpha (cytosolic), class A member 115310.190-0.1197No
15RPS6KA4RPS6KA4
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 415950.157-0.1349No
16RHOARHOA
Entrez,  Source
ras homolog gene family, member A16990.091-0.1636No
17CDK5CDK5
Entrez,  Source
cyclin-dependent kinase 517090.082-0.1644No
18ARHGAP3517250.076-0.1672No
19PAK4PAK4
Entrez,  Source
p21(CDKN1A)-activated kinase 417500.056-0.1731No
20KRASKRAS
Entrez,  Source
v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog18370.011-0.1985No
21RDXRDX
Entrez,  Source
radixin1885-0.025-0.2120No
22RHOCRHOC
Entrez,  Source
ras homolog gene family, member C1896-0.032-0.2143No
23AP2A1AP2A1
Entrez,  Source
adaptor-related protein complex 2, alpha 1 subunit1908-0.044-0.2166No
24HSP90AB1HSP90AB1
Entrez,  Source
heat shock protein 90kDa alpha (cytosolic), class B member 11925-0.057-0.2201No
25NRASNRAS
Entrez,  Source
neuroblastoma RAS viral (v-ras) oncogene homolog1977-0.088-0.2333No
26YWHABYWHAB
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide1989-0.098-0.2343No
27AP2M1AP2M1
Entrez,  Source
adaptor-related protein complex 2, mu 1 subunit2008-0.113-0.2372No
28CLASP1CLASP1
Entrez,  Source
cytoplasmic linker associated protein 12018-0.116-0.2372No
29AP2S1AP2S1
Entrez,  Source
adaptor-related protein complex 2, sigma 1 subunit2026-0.126-0.2364No
30DNM2DNM2
Entrez,  Source
dynamin 22115-0.190-0.2584No
31CLTCCLTC
Entrez,  Source
clathrin, heavy chain (Hc)2121-0.198-0.2554No
32CSNK2A1CSNK2A1
Entrez,  Source
casein kinase 2, alpha 1 polypeptide2123-0.200-0.2511No
33RAC1RAC1
Entrez,  Source
ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)2140-0.209-0.2512No
34PFN1PFN1
Entrez,  Source
profilin 12241-0.273-0.2748No
35EZR2394-0.370-0.3118No
36CSNK2A2CSNK2A2
Entrez,  Source
casein kinase 2, alpha prime polypeptide2435-0.404-0.3146No
37AP2B1AP2B1
Entrez,  Source
adaptor-related protein complex 2, beta 1 subunit2437-0.407-0.3056No
38RANBP9RANBP9
Entrez,  Source
RAN binding protein 92462-0.430-0.3030No
39SPTBN2SPTBN2
Entrez,  Source
spectrin, beta, non-erythrocytic 22495-0.455-0.3022No
40EGFREGFR
Entrez,  Source
epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)2497-0.456-0.2921No
41RRASRRAS
Entrez,  Source
related RAS viral (r-ras) oncogene homolog2640-0.577-0.3214No
42RPS6KA1RPS6KA1
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 12662-0.595-0.3141No
43CFL1CFL1
Entrez,  Source
cofilin 1 (non-muscle)2684-0.609-0.3065No
44DLG1DLG1
Entrez,  Source
discs, large homolog 1 (Drosophila)2804-0.735-0.3253No
45RHOGRHOG
Entrez,  Source
ras homolog gene family, member G (rho G)2918-0.866-0.3394No
46ANK3ANK3
Entrez,  Source
ankyrin 3, node of Ranvier (ankyrin G)3100-1.143-0.3675Yes
47SPTAN1SPTAN1
Entrez,  Source
spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)3138-1.214-0.3509Yes
48PRNPPRNP
Entrez,  Source
prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia)3180-1.309-0.3333Yes
49SPTBN1SPTBN1
Entrez,  Source
spectrin, beta, non-erythrocytic 13205-1.374-0.3092Yes
50MYH10MYH10
Entrez,  Source
myosin, heavy chain 10, non-muscle3214-1.393-0.2798Yes
51VASPVASP
Entrez,  Source
vasodilator-stimulated phosphoprotein3265-1.518-0.2602Yes
52MYL6MYL6
Entrez,  Source
myosin, light chain 6, alkali, smooth muscle and non-muscle3340-1.922-0.2385Yes
53ARHGEF12ARHGEF12
Entrez,  Source
Rho guanine nucleotide exchange factor (GEF) 123345-1.954-0.1952Yes
54ABLIM1ABLIM1
Entrez,  Source
actin binding LIM protein 13346-1.956-0.1506Yes
55MYH9MYH9
Entrez,  Source
myosin, heavy chain 9, non-muscle3353-1.984-0.1072Yes
56MYH14MYH14
Entrez,  Source
myosin, heavy chain 143362-2.145-0.0608Yes
57ENAHENAH
Entrez,  Source
enabled homolog (Drosophila)3395-3.1780.0021Yes
Table: GSEA details [plain text format]



Fig 2: REACTOME_AXON_GUIDANCE: Random ES distribution   
Gene set null distribution of ES for REACTOME_AXON_GUIDANCE